New backbone
This commit is contained in:
1
.claude/scheduled_tasks.lock
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1
.claude/scheduled_tasks.lock
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{"sessionId":"ce21bc15-a2ef-47a3-ac8b-8dad11b440dd","pid":9390,"procStart":"45841","acquiredAt":1778247797938}
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24
.claude/settings.local.json
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24
.claude/settings.local.json
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{
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"permissions": {
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"allow": [
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"Bash(python3 -c ' *)",
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"Bash(python3 -)",
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"Bash(python3 -m src.utils.detector test_image.jpg)",
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"Bash(python3 -c \"import sys; print\\(sys.executable\\)\")",
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"Bash(pip show *)",
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"Bash(.venv/bin/python -m src.utils.detector test_image.jpg)",
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"Bash(.venv/bin/python -)",
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"Bash(cat)",
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"Bash(.venv/bin/python /tmp/eval_model.py)",
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"Bash(.venv/bin/python /tmp/eval_final.py)",
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"Bash(.venv/bin/python identify.py test_image.jpg)",
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"Bash(.venv/bin/python -m src.data.generate_aug_test_set)",
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"Bash(.venv/bin/python -c ' *)",
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"Bash(.venv/bin/python -m src.models.train --epochs 5)",
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"Bash(.venv/bin/python -m src.models.evaluate)",
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"Bash(.venv/bin/python -m src.models.evaluate --backbone resnet34 --model_path models/best_resnet34_model.pth)",
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"Bash(.venv/bin/python identify.py test_image2.jpg --backbone resnet34 --model_path models/best_resnet34_model.pth)",
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"Bash(.venv/bin/python src/models/regression_model.py)"
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]
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}
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}
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@@ -13,6 +13,9 @@ All commands must be run from the project root using the local venv:
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# Train the model
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.venv/bin/python -m src.models.train --epochs 50 --batch_size 64 --lr 1e-4
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# Evaluate a trained model on val and aug_test sets
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.venv/bin/python -m src.models.evaluate [--backbone resnet18|resnet34] [--model_path <path>]
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# Run inference only (no registry lookup)
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.venv/bin/python src/models/inference.py <image_path>
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19
identify.py
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identify.py
@@ -8,7 +8,11 @@ from src.registry.database import SpindaRegistry
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from src.data.high_fidelity_generator import generate_high_fidelity_spinda
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from src.utils.detector import SpindaDetector # Import the detector
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def identify_spinda(image_path: str):
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def identify_spinda(
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image_path: str,
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model_path: str = "models/best_spinda_model.pth",
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backbone: str = "resnet18",
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):
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if not os.path.exists(image_path):
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print(f"Error: File {image_path} not found.")
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return
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@@ -33,7 +37,7 @@ def identify_spinda(image_path: str):
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# 2. Inference (Model Prediction) using the cropped image
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try:
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inf = SpindaInference(model_path="models/best_spinda_model.pth")
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inf = SpindaInference(model_path=model_path, backbone=backbone)
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coords, fingerprint = inf.predict(temp_cropped_path)
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except Exception as e:
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print(f"Error during inference: {e}")
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@@ -71,7 +75,10 @@ def identify_spinda(image_path: str):
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print("\nNote: Accuracy depends on model training progress.")
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if __name__ == "__main__":
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if len(sys.argv) < 2:
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print("Usage: python identify.py <image_path>")
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else:
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identify_spinda(sys.argv[1])
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import argparse
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parser = argparse.ArgumentParser()
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parser.add_argument("image_path")
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parser.add_argument("--backbone", type=str, default="resnet18", choices=["resnet18", "resnet34", "convnext_tiny"])
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parser.add_argument("--model_path", type=str, default="models/best_spinda_model.pth")
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args = parser.parse_args()
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identify_spinda(args.image_path, model_path=args.model_path, backbone=args.backbone)
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Before Width: | Height: | Size: 2.1 KiB After Width: | Height: | Size: 2.1 KiB |
@@ -30,7 +30,7 @@ def evaluate(model: torch.nn.Module, device: torch.device, name: str, ds: Spinda
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if __name__ == "__main__":
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parser = argparse.ArgumentParser()
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parser.add_argument("--model_path", type=str, default="models/best_spinda_model.pth")
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parser.add_argument("--backbone", type=str, default="resnet18", choices=["resnet18", "resnet34"])
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parser.add_argument("--backbone", type=str, default="resnet18", choices=["resnet18", "resnet34", "convnext_tiny"])
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args = parser.parse_args()
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if not os.path.exists(args.model_path):
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@@ -11,9 +11,13 @@ from src.models.regression_model import SpindaRegressionModel
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class SpindaInference:
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"""Loads the trained model and predicts spot coordinates from an image crop."""
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def __init__(self, model_path: str = "models/best_spinda_model.pth"):
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def __init__(
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self,
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model_path: str = "models/best_spinda_model.pth",
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backbone: str = "resnet18",
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):
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self.device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
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self.model = SpindaRegressionModel(pretrained=False)
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self.model = SpindaRegressionModel(pretrained=False, backbone=backbone)
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self.model.load_state_dict(
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torch.load(model_path, map_location=self.device)
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)
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@@ -1,16 +1,18 @@
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import torch
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import torch.nn as nn
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from torchvision import models
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from torchvision.models import ResNet18_Weights, ResNet34_Weights
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from torchvision.models import ResNet18_Weights, ResNet34_Weights, ConvNeXt_Tiny_Weights
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# (factory, default_weights, feature_dim)
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_BACKBONES = {
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"resnet18": (models.resnet18, ResNet18_Weights.DEFAULT),
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"resnet34": (models.resnet34, ResNet34_Weights.DEFAULT),
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"resnet18": (models.resnet18, ResNet18_Weights.DEFAULT, 512),
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"resnet34": (models.resnet34, ResNet34_Weights.DEFAULT, 512),
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"convnext_tiny": (models.convnext_tiny, ConvNeXt_Tiny_Weights.DEFAULT, 768),
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}
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class SpindaRegressionModel(nn.Module):
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"""ResNet backbone with 8 independent 16-class coordinate heads.
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"""CNN backbone with 8 independent 16-class coordinate heads.
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Each of the 8 output coordinates (4 spots × x, y) is treated as a
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16-class classification problem over the [0, 15] nibble grid.
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@@ -25,23 +27,29 @@ class SpindaRegressionModel(nn.Module):
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super().__init__()
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if backbone not in _BACKBONES:
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raise ValueError(f"backbone must be one of {list(_BACKBONES)}; got {backbone!r}")
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factory, default_weights = _BACKBONES[backbone]
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factory, default_weights, feat_dim = _BACKBONES[backbone]
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weights = default_weights if pretrained else None
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net = factory(weights=weights)
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# Strip the final FC; keep the feature extractor + average pool.
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self.features = nn.Sequential(*list(net.children())[:-1])
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# 8 coordinates × 16 classes each (512-dim output for both resnet18/34)
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self.classifier = nn.Linear(512, 8 * 16)
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if backbone in ("resnet18", "resnet34"):
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# Strip the final FC; flatten the (B, 512, 1, 1) avgpool output.
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self.features = nn.Sequential(*list(net.children())[:-1], nn.Flatten())
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elif backbone == "convnext_tiny":
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# Keep features + avgpool + LayerNorm (classifier[0]); drop the final Linear.
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self.features = nn.Sequential(
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net.features, net.avgpool, net.classifier[0], nn.Flatten()
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)
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self.classifier = nn.Linear(feat_dim, 8 * 16)
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def forward(self, x: torch.Tensor) -> torch.Tensor:
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x = self.features(x) # (B, 512, 1, 1)
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x = x.flatten(1) # (B, 512)
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x = self.features(x) # (B, feat_dim)
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x = self.classifier(x) # (B, 128)
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return x.view(-1, 8, 16) # (B, 8, 16)
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if __name__ == "__main__":
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for name in ("resnet18", "resnet34"):
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for name in ("resnet18", "resnet34", "convnext_tiny"):
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model = SpindaRegressionModel(pretrained=False, backbone=name)
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out = model(torch.randn(2, 3, 128, 128))
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print(f"{name}: output {out.shape}, predictions {out.argmax(dim=2)}")
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@@ -198,7 +198,7 @@ if __name__ == "__main__":
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parser.add_argument("--model_path", type=str, default="models/best_spinda_model.pth")
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parser.add_argument("--num_workers", type=int, default=4, help="DataLoader worker count (0 = main process only)")
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parser.add_argument("--epoch_size", type=int, default=200000, help="Virtual dataset size per epoch")
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parser.add_argument("--backbone", type=str, default="resnet18", choices=["resnet18", "resnet34"])
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parser.add_argument("--backbone", type=str, default="resnet18", choices=["resnet18", "resnet34", "convnext_tiny"])
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parser.add_argument("--save_path", type=str, default="", help="Override checkpoint save path")
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args = parser.parse_args()
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